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DNA polymerase I which is inhibited by dideoxynucleoside triphosphates is used in the Sanger method for DNA sequencing.

A) True
B) False

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In photoreactivation, DNA damage caused by UV light is reversed by DNA photolyase which


A) is activated by UV light to form a complex.
B) removes nicks in the DNA backbone.
C) forms a complex with thymine dimers which absorbs visible light and reverses the dimerization.
D) binds to the adenine bases opposite the thymine dimer.
E) All of the above

F) None of the above
G) A) and C)

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The replication of DNA is because .


A) conservative; one strand of parental DNA is retained in each daughter DNA
B) conservative; each daughter molecule has two new strands copied from the parental DNA template
C) semiconservative; one strand of parental DNA is retained in each daughter DNA
D) semiconservative; each daughter molecule has two new strands copied from the parental DNA template

E) B) and D)
F) B) and C)

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DNA fingerprinting is possible for identification because each person accumulates over a hundred mutations during his or her lifetime.

A) True
B) False

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Since deamination is a common cause of DNA damage, and since the deamination of cytosine forms a product similar in structure to uracil, repair enzymes cannot repair this damage easily.

A) True
B) False

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How are the BRCA proteins and their genes implicated in breast cancer?


A) The BRCA proteins damage DNA by generating double-stranded breaks which can lead to cancer.
B) Cells become more susceptible to damage if the genes for these proteins are damaged.
C) BRCA proteins inhibit excision repair mechanisms.
D) BRCA proteins initiate recombination between non-homologous DNA sequences.

E) A) and B)
F) B) and C)

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B

What is the DNA sequence 5ʹ → 3ʹ) determined in this gel? Assume the samples were applied near the top of the gel. What is the DNA sequence 5ʹ → 3ʹ)  determined in this gel? Assume the samples were applied near the top of the gel.   A)  AGGCTGGACGA B)  AGGGGCTAGCA C)  AGGCTGACGGA D)  AGGCAGTCGGA


A) AGGCTGGACGA
B) AGGGGCTAGCA
C) AGGCTGACGGA
D) AGGCAGTCGGA

E) None of the above
F) All of the above

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The polymerization of DNA is essentially irreversible due to the hydrolysis of pyrophosphate.

A) True
B) False

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What is the function of the primosome?


A) Removal of RNA from the lagging strand.
B) Synthesis of short RNA fragments.
C) Assembly of DNA polymerase III holoenzyme.
D) Detection of the origin of replication.

E) All of the above
F) B) and D)

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In E. coli replication begins at the origin of replication and proceeds in one direction until the entire circular DNA molecule has been copied.

A) True
B) False

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The general excision repair pathway for DNA repair has the following order:


A) endonuclease cuts → helicase or endonuclease removes → DNA polymerase → DNA ligase
B) DNA ligase → DNA polymerase → helicase or endonuclease removes → endonuclease cuts
C) endonuclease cuts → DNA polymerase repairs → helicase opens up → DNA ligase
D) endonuclease cuts → DNA ligase removes → endonuclease removes → DNA ligase

E) A) and C)
F) None of the above

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Eukaryotic cells contain at least five DNA polymerases all of which are responsible for nuclear DNA replication.

A) True
B) False

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The purpose of SSB is to prevent single-stranded DNA from folding back on itself to form double-helical regions.

A) True
B) False

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In DNA repair, DNA glycosylases recognize deaminated bases within the DNA polymer and remove the deaminated


A) nucleoside.
B) nucleotide.
C) thymine dimers.
D) bases.

E) None of the above
F) All of the above

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Meselson and Stahlʹs experiments involved growing E. coli on a medium containing 15N heavy nitrogen) which increased the density of the bacterial DNA. Cells were then grown on a medium containing only 14N. DNA samples were obtained for analysis after one, two and three rounds of replication generations) and centrifuged on a density gradient. The double-helical DNA forms bands in the gradient depending on its density. How many bands did Meselson and Stahl see after two generation of cells were grown on the 14N medium?


A) One with DNA containing both 15N and 14N.
B) Two, one with DNA containing only 15N and one with DNA containing only 14N.
C) Two, one with DNA containing both 15N and 14N and one with DNA containing only 14N.
D) Three, one with DNA containing only 15N, one with DNA containing both 15N and 14N and one with DNA containing only 14N.

E) A) and C)
F) B) and C)

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Deaminated bases must be removed from DNA because


A) they distort the molecule.
B) they form thymine dimers.
C) they pair incorrectly during replication.
D) the mRNA formed may be irregular.

E) None of the above
F) A) and B)

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C

How many replisomes are required for one complete round of DNA replication in E. coli?


A) one
B) two
C) four
D) more than 4

E) None of the above
F) B) and C)

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B

The β subunits of E. coli DNA polymerase form a sliding clamp that surrounds the DNA strands at the replication fork.

A) True
B) False

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The main difference between prokaryotic and eukaryotic DNA replication mechanisms is


A) no Okazaki fragments are made in eukaryotes.
B) both leading and lagging strands are continuous in eukaryotes.
C) no primer synthesis is needed in eukaryotes.
D) the replication fork moves slower in eukaryotes.

E) B) and C)
F) A) and D)

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E. coli DNA polymerase catalyzes polymerization in the directions) .


A) 5ʹ → 3ʹ
B) 3ʹ → 5ʹ
C) 2ʹ → 5ʹ
D) both 5ʹ → 3ʹ and 3ʹ → 5ʹ
E) All of the above

F) C) and E)
G) C) and D)

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